Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930021.1_cds_XP_016477178.1_68936
CDS Infomation

[gene=LOC107798673] [db_xref=GeneID:107798673] [protein=condensin complex subunit 2] [protein_id=XP_016477178.1] [location=join(3310..3537,3616..3717,4051..4168,4624..4697,4781..4841,4932..5132,5250..5533,5640..5784,5915..6165,6247..6277,6884..7035,8141..8242,9747..9962)] [gbkey=CDS]
Sequence

ATGGCCGAAACCCTAAGCCCTAATACCAAACAGAAAGGCCCATTTTCTCCGACAAAATTT
GTCTTGGGCTCCAATGATGACAAGCTTGAACGTGCTCGGGCACGCGCCGCCCGTGCTGCC
GTTATCCGTCGCAAACCACTCCCTGTCCCGCCTCCGTCATCTACTTGCCTTGACGAGCAG
CAGATTCTCGAACTCTTCCAGAATTGCATCAAACTCGCCAGTGAAAATAAAATTAATCAG
AAGAATACTTGGGAGCTAGGTTTGATTGATCATCTATGCGAAATCGTTAAAGTTGAACAA
GAGAATGATTCTGAGACCAACTTTCAGAAGGCTAGTTGTACTCTTGAGGCTGGAGTTAAG
ATTTACTCAATGAGGGTGGACTCAGTACATTCAGAGGCATATAAAGTTCTTGGAGGAATC
AATCGTGTTGGTAAAGGAAATGATCAAGATCCTGTTGTAGAGGATGCCAATGCTGAAAAT
GAGCAGGAGGAAGGTCACCCTAGAGAAGAGCAAGAAAAAAAGCTATCGCCTTTATCAACA
CTAGAGTCATCATTCGATTCTATCAATGTGAAGAAATTTGATGCCGCTTTTGCTGTTGAT
CCTCTTTATCATCAGACATCAGCTCAGTTTGATGAAGGTGGTGCAAAGGGTCTTTTGTTG
AATAACCTAGGAATCTATGGTACTTGCAGTGTCCTTTTTGATTCATGCGAGATACCTGGG
AAGTCAATACCAGAAGAAATTCGGAATGATAGAACAGATTCCATTGATATATGTTTTGCT
AAAGATTGTGTTGAAGAAATGGTATTGAATATGCCCAAGAAGGACGAGATATCACCGAGT
CTGAGGCATATGATTAGTCAATTCAGTGGAGAGATGCAGGTGCCAGCTGAAACAGATTTT
TCTAGCCAGCTTTCACCAGAACAAACTTCTGAATCGTTTGGCCTAGATGTGGATGATGGT
GATGTATTTGACAATTCTGGAGCCTGGCCGATGGATCATGATGATGGAATAGATGTGGCA
GAACAAGGCTCTCACAATATTGATCAAATTTCATCAGGGCAACAGGAGGGCACTGAACCA
TTTACTTTTCTCGATGCTGAAGATGATGACAGATCTGAGAGAGTTGATGATTACTTGTTT
TTAAGTTTAGGATTTTCTTCAAAGCACAATTCCTGGGCTGGTCCTGATCATTGGAAGTAT
CGGAAGGTGAAAGTCTCAGAGGAGCCTTGCAAGGAAGATGGATCACCAGTAAAGACTAAG
AAAACAAAGAGCAGAAAAGCAGAACCTGAAATTTCTTTCACAAAAGCATTGGACACTGAT
CTATCGCATGTCTTTGCTCCTCCAAAGAATCCCAAGTTACTACTCCTTCCAGCTAATAGA
ACATCGTGTAACAGGTTACTTCCAGAAGATTGTCATTATCAACCTGAGAATCTTGTGAAG
CTGTTTCTCCGATCCAATGTCACGTGCCTCGGAAGGAGAGGAAAGAAAGTCCCAGATGAA
GCCGGTCAACAAAGTGATGATTTTGGAGCTATGCCATCTTGGGATGATGATGGTGGATTT
CCTGGGACTTTTGATGATACTTTTGATGATGGCAATGCATTTAGTGATGTTGAGGAGTCA
AGTACACTTGTCTCTCAACCTCGCCAGGTAAACAAGATTGAAGTCCAGTATGATAAAACA
TCCAAACAAGTAGATGTTCAAGTGCTTAAGGAAACGCTTTGGGACCAATTAAATCAAACA
TCAGTTAAGGAAGAAAGTGTATCTTTCAAGCACATCTTGGCTGCTTTTCCAAATGAATGC
AGAGCGTCAGCATCGATTGAGGCTATATCTCCACATTTATGCTTTATTTGCTTGTTGCAT
CTTGCAAATGAACATGGATTACGGATACAAGGTTGTGTCAACTTGGATGACCTCAGTATA
CAGCTGGAAGCTCACAATAATAGTCTCCCTAATGCTGTGGCCTAA

Peptide Sequence

PEP ID

XP_016477178.1
PEP Infomation

PREDICTED: condensin complex subunit 2 [Nicotiana tabacum]
Sequence

MAETLSPNTKQKGPFSPTKFVLGSNDDKLERARARAARAAVIRRKPLPVPPPSSTCLDEQ
QILELFQNCIKLASENKINQKNTWELGLIDHLCEIVKVEQENDSETNFQKASCTLEAGVK
IYSMRVDSVHSEAYKVLGGINRVGKGNDQDPVVEDANAENEQEEGHPREEQEKKLSPLST
LESSFDSINVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGIYGTCSVLFDSCEIPG
KSIPEEIRNDRTDSIDICFAKDCVEEMVLNMPKKDEISPSLRHMISQFSGEMQVPAETDF
SSQLSPEQTSESFGLDVDDGDVFDNSGAWPMDHDDGIDVAEQGSHNIDQISSGQQEGTEP
FTFLDAEDDDRSERVDDYLFLSLGFSSKHNSWAGPDHWKYRKVKVSEEPCKEDGSPVKTK
KTKSRKAEPEISFTKALDTDLSHVFAPPKNPKLLLLPANRTSCNRLLPEDCHYQPENLVK
LFLRSNVTCLGRRGKKVPDEAGQQSDDFGAMPSWDDDGGFPGTFDDTFDDGNAFSDVEES
STLVSQPRQVNKIEVQYDKTSKQVDVQVLKETLWDQLNQTSVKEESVSFKHILAAFPNEC
RASASIEAISPHLCFICLLHLANEHGLRIQGCVNLDDLSIQLEAHNNSLPNAVA

Transcript Sequence

Gene sequence data has not been registered.